PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_07278
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 170aa    MW: 19413.9 Da    PI: 7.9372
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_07278genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.62.3e-2182131255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+WvAeIrdp+    r  r +lg+f+taeeAa+a+++a+ +++g
  PEQU_07278  82 KYRGVRQRP-WGKWVAEIRDPR----RaVRKWLGTFDTAEEAARAYDKAAIEFRG 131
                 8********.**********82....48************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-1482131IPR001471AP2/ERF domain
SMARTSM003803.7E-3582143IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-3282139IPR001471AP2/ERF domain
PROSITE profilePS5103224.65882139IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-2382139IPR016177DNA-binding domain
PRINTSPR003678.6E-128394IPR001471AP2/ERF domain
CDDcd000181.32E-3185138No hitNo description
PRINTSPR003678.6E-12105121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MEPNPPTKRR LSAEQETSIL IESLIHVISG MPDDTAPTFS LPAVDNCKQC GVDGCLGCHF  60
FESSVLSEDK RSKRRKREKR IKYRGVRQRP WGKWVAEIRD PRRAVRKWLG TFDTAEEAAR  120
AYDKAAIEFR GARAKLNFSS VDQVIELTPT AGTTEEEISR ESPDEWIYLE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2083138662ATERF1
3gcc_A1e-2083138662ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17378RRKREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003574623.19e-50PREDICTED: ethylene-responsive transcription factor ERF109-like
SwissprotQ9SZ062e-31EF109_ARATH; Ethylene-responsive transcription factor ERF109
TrEMBLI1I7T61e-49I1I7T6_BRADI; Uncharacterized protein
STRINGBRADI3G38140.13e-49(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124236124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-26redox responsive transcription factor 1